
The Human Mycobiome: Research Frontiers
An introduction to the fungal communities living on and in the human body, how they are studied and what remains unknown.
An overview of what you will study and build.
The Human Mycobiome: Research Frontiers introduces the fungal communities that live on the skin, in the gut and in the respiratory tract. Students learn what the mycobiome is, how it differs between body sites and why it is much less abundant and less studied than the bacterial microbiome. The course explains the methods used to profile fungal communities, from culture to amplicon sequencing and metagenomics, and explores interactions with bacteria and the immune system as well as reported associations with disease.
Mycobiome science is young, and many findings are associations rather than established causes. The course emphasises careful study design and honest interpretation, and makes no therapeutic claims. It suits researchers, clinicians in training and life-science graduates who want to engage with the field. Tutors are active mycobiome researchers. For the final project, students design a mycobiome study protocol addressing one open question, including sampling, controls, sequencing strategy, bioinformatics approach and the limitations of the chosen design.
6 modules, one growing line of knowledge.
Hover or tap a module to follow the path from the first session to the final project. Open a module to see the topics it covers.
- Defining the mycobiome
- Resident and transient fungi
- History of the field
- Gut fungal communities
- Skin fungi and Malassezia
- The respiratory mycobiome
- Culture-based approaches
- ITS amplicon sequencing
- Shotgun metagenomics and databases
- Fungal-bacterial interactions
- Immune recognition of commensal fungi
- Effects of antibiotics and diet
- Inflammatory bowel disease studies
- Skin and respiratory conditions
- Association versus causation
- Key unanswered questions
- Controls and contamination
- Designing robust studies
The Human Mycobiome: Research Frontiers
By the end you will be able to:
- Define the human mycobiome and describe its main body-site communities.
- Compare culture, amplicon and metagenomic methods for mycobiome profiling.
- Explain interactions between fungi, bacteria and the immune system.
- Critically interpret reported associations between the mycobiome and disease.
- Design a mycobiome study with appropriate controls.
Where this programme sits in the school.
Where this programme can take you.
Roles and uses that build on what you learn here. Outcomes depend on your experience and local market.
- Research assistant in microbiome science
- Bioinformatics technician for amplicon data
- Laboratory scientist in a sequencing facility
- Scientific writer on microbiome research
- Clinical research coordinator in microbiome studies
Requirements, assessment and certificate.
Admission requirements
A life-science background is recommended; familiarity with basic molecular biology is helpful.
How you are assessed
Progress is assessed through participation in live seminars and exercises based on published studies. The final protocol is reviewed by the professor.
Final project
A mycobiome study protocol addressing one open research question, with sampling, controls and analysis plan.
Certificate
Course Certificate
On completing the programme and its project, Fungaris issues a Course Certificate. Accreditations are assessed according to the training completed and the local regulations of each country.
How the programme grows, phase by phase.
- What the mycobiome is
- Gut, skin and respiratory mycobiomes
- Methods for mycobiome profiling
- Interactions with bacteria and the immune system
- Mycobiome and disease associations
- Open questions and research design
Related searches
Questions about this programme
Do I need experience to study The Human Mycobiome: Research Frontiers?
A life-science background is recommended; familiarity with basic molecular biology is helpful.
How is The Human Mycobiome: Research Frontiers taught?
Live online, in 6 modules with a working professional, a small group and a final project.
How am I assessed?
Progress is assessed through participation in live seminars and exercises based on published studies. The final protocol is reviewed by the professor.
What is the final project?
A mycobiome study protocol addressing one open research question, with sampling, controls and analysis plan.
What certificate do I get?
On completing the programme and its project, Fungaris issues a Course Certificate. Accreditations are assessed according to the training completed and the local regulations of each country.
What can I study after The Human Mycobiome: Research Frontiers?
The natural next step is Diploma in Medical Mycology Foundations.
Keep branching.
From our species guide.
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Pay in full with a 20% reduction, or reserve your place with 40% and pay the rest in monthly instalments. All prices are stated in US dollars (USD).
